📋 Analysis Log
Error Information
📁 Main Task Files (for subsequent analysis) （Inherited from parent）
📊 Task Summary
Result Files
Tool Introduction & Use Cases
Genome Plot is primarily used for bioinformatics analysis.
Features: 1. Professional genome visualization based on karyoploteR package 2. Support multiple genome versions (hg38, hg19, mm10, etc.) 3. Display genomic data at chromosome level 4. Automatically calculate and adjust Y-axis range 5. Customizable point color and size 6. Add chromosome genomic position markers 7. Support various plot type layouts 8. Input format: Contains chr (chromosome), start, end, value columns 9. Suitable for CNV analysis, epigenetics data, genome-wide association studies 10. Supports CSV, TXT, XLSX formats
Main Use Cases:
- Explore data patterns and support subsequent in-depth analysis
Key Features:
- Standardized processing and result export
- Key charts and table output
- Can be used as input for subsequent analysis
Parameter Details
| Parameter | Meaning & Recommendations | Settings |
|---|---|---|
| Genome Data File | 包含chr, start, end, value列的文件 | Required Default: None |
| Genome Version | 选择基因组参考版本 | Optional Default: hg38 |
| Point Color | Color Palette: Improves figure readability and distinguishes groups. Recommendation: Use higher contrast palettes for many categories; use gradients for continuous variables. | Optional Default: red |
| Point Size | 数据点的大小（1-20） | Optional Default: 6 |
Input File Requirements
Please ensure your input file format is correct, as this is fundamental to successful analysis. Typically, you need to provide a data matrix containing gene/protein expression values.
This tool does not currently provide sample files. Please refer to the common format: typically CSV or TXT files with the first column as gene/protein IDs, followed by expression values for each sample.
Frequently Asked Questions
Q: How long does the analysis take?
A: Estimated execution time is approximately 120 seconds, depending on your data size and current server load.
Q: What if the analysis fails?
A: If the analysis fails, your credits will not be deducted. First, check if your input file format matches the sample file, or adjust parameters based on error messages. If the problem persists, please contact us through the page's feedback function.
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